DeepVariant Datasets

public
Browse Search
    DeepVariant Datasets

    Sample data used for testing and benchmarking the DeepVariant variant caller.

    URI
    Region
    Browse this bucket on the command-line
gs://deepvariant • 7.8K files, 4.71 TB
BAM
GZ
FASTQ
VCF
CRAM
Other
Most-viewed files
File Views
HG003.novaseq.pcr-free.35x.dedup.grch38_no_alt.bam 2,446
HG001.novaseq.pcr-free.30x.R1.fastq.gz 1,599
HG002.pfda_challenge.35x.grch38.bam 142
deepvariant.output.vcf.gz 122
HG003.pfda_challenge.35x.grch38.bam 111
Largest files
File Size
HG003_R104_sup_merged.80x.bam 257 GB
HG003_R1041_Guppy6_sup_2_GRCh38.pass.bam 178 GB
HG002_R104_sup_merged.50x.bam 178 GB
HG004_R104_sup_merged.40x.bam 136 GB
HG003_hybrid_35x_ilmn_35x_pacb.grch38.phased.bam 133 GB